GitHub

FastCCC: A permutation-free framework for scalable, robust, and reference-based cell-cell communication analysis in single cell transcriptomics studies.

[2026.05.22] Release: FastCCC v1.0.1 is now available. This release fixes several potential bugs, adds coding-agent skills for natural-language FastCCC workflows, and improves automated reports with ...
GitHub

CLIP-seq Analysis of Multi-mapped reads

CLAM is a general toolkit for re-aligning multi-mapped reads in CLIP/RIP-seq data and calling peaks. For details, please read our NAR paper. Recently, we updated CLAM ...
Frontiers

Spatiotemporal Permutation Entropy as a Measure for Complexity of Cardiac Arrhythmia

Permutation entropy (PE) is a robust quantity for measuring the complexity of time series. In the cardiac community it is predominantly used in the context of electrocardiogram (ECG) signal analysis ...
Frontiers

MEG and EEG data analysis with MNE-Python

Magnetoencephalography and electroencephalography (M/EEG) measure the weak electromagnetic signals generated by neuronal activity in the brain. Using these signals to characterize and locate neural ...