Genomic prediction and design now require models that connect local motifs with megabase scale regulatory context and that operate across many organisms. Nucleotide Transformer v3, or NTv3, is ...
Ongoing work in functional annotations of genomes has generated rich datasets. We propose a method to link extensive functional annotations to genotype-to-phenotype associations. This method ranks ...
Copyright: © 2023 The Author(s). Published by Elsevier B.V. Two new AD/dementia GWAS have dramatically expanded the sample sizes and the number of disease ...
Re-organization of the software package => user-friendly version with Docker. Speed up file reading in R with data.table. Fix bugs in hg38 annotation. Default option "-td" changed to FALSE. Output ...
Creative Commons (CC): This is a Creative Commons license. Attribution (BY): Credit must be given to the creator. Non-Commercial (NC): Only non-commercial uses of the work are permitted. Optimization ...
Metagenomic studies unravel details about the taxonomic composition and the functions performed by microbial communities. As a complete metagenomic analysis requires different tools for different ...
The Tandem Repeat Annotation Library (TRAL) focuses on analyzing tandem repeat units in genomic sequences. TRAL can integrate and harmonize tandem repeat annotations from a large number of external ...
jSouth Africa MRC Unit on Risk and Resilience in Mental Disorders, Department of Psychiatry and Neuroscience Institute, University of Cape Town, Cape Town, South Africa kDepartment of Clinical, ...
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